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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
ChIP-seq
23
ATAC-seq
22
single cell RNA-seq
22
total RNA-seq
6
DNase-seq
1
pCHi-C
Assay category
44
Transcription
31
DNA binding
29
DNA accessibility
Target of assay
16
control
15
transcription factor
7
RNA binding protein
Date released
38
September, 2020
24
May, 2022
20
October, 2018
7
December, 2018
6
November, 2018
4
December, 2017
3
October, 2017
2
August, 2017
1
August, 2018
Available data
105
fastq
66
bam
44
bed narrowPeak
26
bigWig
23
bigBed narrowPeak
6
bed bed3+
6
bed broadPeak
6
bigBed broadPeak
6
txt
1
bedpe bed3+
1
zippedFastqFolder
Organism
105
Homo sapiens
Biosample type
66
tissue
38
primary cell
1
in vitro differentiated cells
Organ
54
pancreas
16
epithelium
13
adipose tissue
13
connective tissue
9
spleen
7
liver
Project
67
AMP
38
HPAP
Genome assembly (visualization)
44
hg19
26
GRCh38
Lab
43
AMP-T2D consortium
38
Klaus Kaestner, Upenn
24
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
105 results
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ChIP-seq
ATAC-seq
single cell RNA-seq
total RNA-seq
DNase-seq
pCHi-C
tissue
islet of Langerhans
18
6
body of pancreas
11
1
2
spleen
7
1
1
omental fat pad
6
1
1
right lobe of liver
4
1
1
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primary cell
Langerhans cell
22
pancreatic alpha cell
15
pancreatic beta cell
1
in vitro differentiated cells
white fat cell
1
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