Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 36single cell RNA-seq
  • 10ATAC-seq
  • 4DNase-seq
  • 2total RNA-seq
Assay category
  • 38Transcription
  • 14DNA accessibility
Date released
  • 23April, 2018
  • 13July, 2018
  • 7August, 2020
  • 4November, 2018
  • 3September, 2020
  • 1August, 2018
  • 1June, 2018
Available data
  • 52bigWig
  • 52fastq
  • 42bam
  • 38tsv
  • 4bed bed3+
  • 4bed broadPeak
  • 4bed narrowPeak
  • 4bigBed broadPeak
  • 4bigBed narrowPeak
Organism
  • 52Homo sapiens
Biosample type
  • 40primary cell
  • 12tissue
Organ
  • 42pancreas
  • 34epithelium
  • 2connective tissue
  • 1adipose tissue
  • 1brain
  • 1spleen
Project
  • 42AMP
  • 10HPAP
Genome assembly (visualization)
  • 52GRCh38
  • 42hg19
Lab
  • 42AMP-T2D consortium
  • 10Klaus Kaestner, Upenn
files.read_length!
  • 50
BIOSAMPLE
ASSAY

52 results

search-icontable-tab-icon
Clear Filters
single cell RNA-seq
ATAC-seq
DNase-seq
total RNA-seq
primary cell
pancreatic alpha cell47
pancreatic beta cell43
pancreatic acinar cell4
pancreatic delta cell4
pancreatic ductal cell4
tissue
islet of Langerhans62
body of pancreas1
brain1
omental fat pad1
spleen1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego