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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 18ATAC-seq
  • 15single cell RNA-seq
  • 4DNase-seq
  • 2total RNA-seq
Assay category
  • 22DNA accessibility
  • 17Transcription
Date released
  • 8July, 2018
  • 7April, 2018
  • 7August, 2020
  • 5September, 2017
  • 4November, 2018
  • 3August, 2017
  • 3September, 2020
  • 1August, 2018
  • 1June, 2018
Available data
  • 39bigWig
  • 39fastq
  • 29bam
  • 17tsv
  • 12bed narrowPeak
  • 12bigBed narrowPeak
  • 4bed bed3+
  • 4bed broadPeak
  • 4bigBed broadPeak
Organism
  • 39Homo sapiens
Biosample type
  • 33primary cell
  • 6tissue
Organ
  • 31pancreas
  • 28epithelium
  • 1adipose tissue
  • 1brain
  • 1connective tissue
  • 1spleen
Project
  • 29AMP
  • 10HPAP
Genome assembly (visualization)
  • 39GRCh38
  • 29hg19
Lab
  • 29AMP-T2D consortium
  • 10Klaus Kaestner, Upenn
files.run_type!
  • single-ended
BIOSAMPLE
ASSAY

39 results

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Clear Filters
ATAC-seq
single cell RNA-seq
DNase-seq
total RNA-seq
primary cell
pancreatic alpha cell102
pancreatic beta cell62
pancreatic acinar cell22
pancreatic cell3
mesenchymal cell2
tissue
islet of Langerhans2
body of pancreas1
brain1
omental fat pad1
spleen1
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