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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
ChIP-seq
9
DNase-seq
6
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
54
DNA binding
10
DNA accessibility
6
DNA methylation
1
Transcription
Target of assay
50
transcription factor
20
RNA binding protein
16
recombinant protein
7
chromatin remodeller
4
control
3
other context
3
other post-translational modification
Date released
709
February, 2021
399
May, 2021
398
August, 2017
367
November, 2017
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
176
May, 2022
160
July, 2018
120
May, 2019
108
July, 2019
90
December, 2017
80
April, 2019
73
September, 2018
71
November, 2018
64
March, 2020
61
November, 2019
49
October, 2018
47
September, 2023
41
September, 2020
40
May, 2024
32
April, 2018
25
February, 2020
24
February, 2018
22
January, 2019
19
April, 2020
17
October, 2017
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
December, 2018
2
June, 2018
1
August, 2022
Available data
71
fastq
70
bam
65
bigWig
59
bed narrowPeak
59
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
1
csv
Organism
71
Homo sapiens
Biosample type
45
cell line
25
tissue
1
primary cell
Organ
49
liver
9
spleen
6
pancreas
3
blood
3
bodily fluid
2
brain
1
adipose tissue
1
connective tissue
Project
71
AMP
Genome assembly (visualization)
64
GRCh38
57
hg19
Lab
71
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
files.read_length!
100
BIOSAMPLE
ASSAY
71 results
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ChIP-seq
DNase-seq
WGBS
FAIRE-seq
single cell RNA-seq
cell line
HepG2
41
1
GM12878
3
tissue
spleen
6
1
2
liver
4
2
body of pancreas
2
2
brain
2
pancreas
1
1
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primary cell
pancreatic cell
1
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