Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
10
total RNA-seq
1
GRO-seq
Assay category
22
DNA binding
10
Transcription
Target of assay
12
histone
12
histone modification
8
narrow histone mark
7
control
4
broad histone mark
3
transcription factor
Date released
13
December, 2017
9
February, 2018
8
August, 2021
2
May, 2021
1
January, 2018
Available data
32
bam
25
bigWig
23
fastq
14
bed narrowPeak
10
tsv
3
bed bed3+
Organism
33
Homo sapiens
Biosample type
25
in vitro differentiated cells
8
cell line
Organ
864
pancreas
742
liver
658
connective tissue
484
epithelium
465
adipose tissue
393
heart
354
kidney
286
brain
236
vasculature
230
blood vessel
159
bone element
141
artery
122
limb
96
musculature of body
61
eye
43
nerve
33
embryo
24
blood
24
bodily fluid
22
vein
20
lung
18
ureter
17
spleen
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
33
AMP
Genome assembly (visualization)
25
GRCh38
25
hg19
1
hg18
Lab
33
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
3
inconsistent control read length
files.read_length!
100
BIOSAMPLE
ASSAY
33 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
18
1
Hepatic endoderm
4
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
cell line
H1-hESC
8
Download