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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 232ChIP-seq
  • 89total RNA-seq
  • 9WGBS
  • 5ATAC-seq
  • 3DNase-seq
  • 2RRBS
  • 1FAIRE-seq
Assay category
  • 232DNA binding
  • 89Transcription
  • 11DNA methylation
  • 9DNA accessibility
Target of assay
  • 156histone modification
  • 155histone
  • 86broad histone mark
  • 68narrow histone mark
  • 43transcription factor
  • 33control
  • 5RNA binding protein
  • 2chromatin remodeller
Date released
  • 715February, 2021
  • 399May, 2021
  • 341August, 2017
  • 341May, 2020
  • 319August, 2021
  • 314October, 2019
  • 292November, 2017
  • 218June, 2019
  • 205February, 2023
  • 200May, 2022
  • 168July, 2018
  • 120May, 2019
  • 108July, 2019
  • 80April, 2019
  • 76October, 2018
  • 73September, 2018
  • 72November, 2018
  • 68December, 2017
  • 64March, 2020
  • 61November, 2019
  • 59September, 2020
  • 49April, 2018
  • 47September, 2023
  • 40May, 2024
  • 35December, 2018
  • 29January, 2019
  • 25February, 2020
  • 19April, 2020
  • 17February, 2018
  • 16January, 2021
  • 16November, 2020
  • 15May, 2023
  • 14October, 2017
  • 10December, 2019
  • 8January, 2018
  • 7August, 2020
  • 5March, 2019
  • 5March, 2023
  • 5September, 2017
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
Available data
  • 222bigWig
  • 217fastq
  • 216bam
  • 94bed narrowPeak
  • 89tsv
  • 66tagAlign
  • 21bed bed3+
  • 20bed broadPeak
  • 16bigBed narrowPeak
  • 2bed bedMethyl
  • 2bigBed bedMethyl
Organism
  • 341Homo sapiens
Biosample type
  • 254tissue
  • 67in vitro differentiated cells
  • 20primary cell
Organ
  • 144pancreas
  • 122connective tissue
  • 55adipose tissue
  • 50liver
  • 24musculature of body
  • 7epithelium
Project
  • 341AMP
Genome assembly (visualization)
  • 222hg19
  • 202GRCh38
Lab
  • 341AMP-T2D consortium
Audit category:
  • 37missing controlled_by
Audit category:
  • 14inconsistent control read length
files.read_length!
  • 36
BIOSAMPLE
ASSAY

341 results

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Clear Filters
ChIP-seq
total RNA-seq
WGBS
ATAC-seq
DNase-seq
RRBS
FAIRE-seq
tissue
islet of Langerhans308911
liver453
subcutaneous abdominal adipose tissue363
skeletal muscle tissue222
white adipose tissue12
in vitro differentiated cells
adipocyte67
primary cell
pancreatic endocrine cell12
pancreatic alpha cell21
pancreatic beta cell21
pancreatic acinar cell1
skeletal muscle myoblast1
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