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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
59
DNA binding
9
DNA accessibility
Target of assay
51
transcription factor
10
RNA binding protein
10
chromatin remodeller
5
control
1
histone
1
histone modification
1
narrow histone mark
Date released
27
December, 2018
17
January, 2019
15
November, 2018
8
January, 2021
1
January, 2018
Available data
59
bam
59
fastq
55
bigWig
54
bed narrowPeak
54
bigBed narrowPeak
Organism
68
Homo sapiens
Biosample type
60
cell line
8
primary cell
Organ
894
pancreas
680
connective tissue
669
liver
493
epithelium
488
adipose tissue
393
heart
354
kidney
266
brain
230
vasculature
227
blood vessel
159
bone element
141
artery
122
limb
94
musculature of body
68
blood
68
bodily fluid
61
eye
43
nerve
24
spleen
22
vein
20
lung
19
embryo
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
60
AMP
8
T1D
Genome assembly (visualization)
55
hg19
54
GRCh38
Lab
60
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
files.read_length!
36
BIOSAMPLE
ASSAY
68 results
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ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
59
1
primary cell
peripheral blood mononuclear cell
8
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