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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 14total RNA-seq
  • 4ChIP-seq
  • 1GRO-seq
Assay category
  • 14Transcription
  • 4DNA binding
Target of assay
  • 2control
  • 2transcription factor
Date released
  • 8August, 2021
  • 4December, 2017
  • 4February, 2018
  • 2May, 2021
  • 1January, 2018
Available data
  • 18bam
  • 17bigWig
  • 14tsv
  • 9fastq
  • 2bed narrowPeak
Organism
  • 19Homo sapiens
Biosample type
  • 11in vitro differentiated cells
  • 8cell line
Organ
  • 894pancreas
  • 680connective tissue
  • 669liver
  • 493epithelium
  • 488adipose tissue
  • 393heart
  • 354kidney
  • 266brain
  • 230vasculature
  • 227blood vessel
  • 159bone element
  • 141artery
  • 122limb
  • 94musculature of body
  • 68blood
  • 68bodily fluid
  • 61eye
  • 43nerve
  • 24spleen
  • 22vein
  • 20lung
  • 19embryo
  • 18ureter
  • 16skeleton
  • 5gonad
  • 5ovary
  • 2intestine
  • 2pericardium
  • 2pituitary gland
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 19AMP
Genome assembly (visualization)
  • 16GRCh38
  • 16hg19
  • 1hg18
Lab
  • 19AMP-T2D consortium
Audit category:
  • 3inconsistent ontology term
Audit category:
  • 1inconsistent control read length
files.read_length!
  • 36
BIOSAMPLE
ASSAY

19 results

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Clear Filters
total RNA-seq
ChIP-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm431
Hepatic endoderm1
mesodermal cell (lineage marker-negative)1
mesodermal cell (pacemaker intermediate)1
cell line
H1-hESC8
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