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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 92ChIP-seq
Assay category
  • 92DNA binding
Target of assay
  • 922histone modification
  • 921histone
  • 468narrow histone mark
  • 452broad histone mark
  • 414transcription factor
  • 289control
  • 92RNA binding protein
  • 89recombinant protein
  • 19chromatin remodeller
  • 5nucleotide modification
  • 3other context
  • 3other post-translational modification
Date released
  • 21November, 2017
  • 19November, 2018
  • 11October, 2018
  • 6January, 2019
  • 5August, 2017
  • 5May, 2019
  • 5May, 2021
  • 5May, 2024
  • 4April, 2019
  • 4June, 2019
  • 3December, 2017
  • 2December, 2018
  • 1August, 2021
  • 1November, 2019
Available data
  • 84bigWig
  • 83bed narrowPeak
  • 81bam
  • 72bigBed narrowPeak
  • 67fastq
  • 1bed bed3+
  • 1tar
Organism
  • 92Homo sapiens
Biosample type
  • 50cell line
  • 26tissue
  • 11in vitro differentiated cells
  • 5primary cell
Organ
  • 42liver
  • 11heart
  • 10blood
  • 10bodily fluid
  • 10connective tissue
  • 8pancreas
  • 6epithelium
  • 5adipose tissue
  • 3blood vessel
  • 3kidney
  • 3vasculature
  • 1artery
  • 1eye
Project
  • 92AMP
Genome assembly (visualization)
  • 81GRCh38
  • 78hg19
Lab
  • 81AMP-T2D consortium
  • 5Kyle Gaulton, UCSD
  • 5Patrick T. Ellinor, Broad
  • 1Bing Ren, UCSD
Audit category:
  • 4inconsistent ontology term
Audit category:
  • 1missing controlled_by
files.read_length!
  • 36
BIOSAMPLE
ASSAY

92 results

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Clear Filters
ChIP-seq
cell line
HepG239
GM1287810
EndoC_BH11
tissue
body of pancreas5
left cardiac atrium5
heart left ventricle3
omental fat pad3
subcutaneous adipose tissue2
in vitro differentiated cells
embryonic stem cell5
adipocyte4
hepatocyte2
primary cell
cardiac fibroblast1
cardiac muscle cell1
epithelial cell of proximal tubule1
kidney epithelial cell1
retinal pigment epithelial cell1
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