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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
278
ChIP-seq
89
total RNA-seq
9
WGBS
6
RRBS
5
DNase-seq
2
ATAC-seq
1
FAIRE-seq
Assay category
278
DNA binding
89
Transcription
15
DNA methylation
8
DNA accessibility
Target of assay
190
histone modification
189
histone
102
broad histone mark
86
narrow histone mark
47
control
41
transcription factor
8
RNA binding protein
3
chromatin remodeller
Date released
699
February, 2021
399
May, 2021
390
August, 2017
353
November, 2017
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
168
July, 2018
161
May, 2022
120
May, 2019
108
July, 2019
83
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
58
September, 2020
49
April, 2018
47
September, 2023
46
December, 2017
40
May, 2024
39
February, 2018
34
December, 2018
25
February, 2020
22
October, 2017
20
January, 2019
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
10
December, 2019
7
August, 2020
6
September, 2017
5
March, 2023
4
August, 2018
4
March, 2019
4
October, 2022
3
January, 2018
3
June, 2018
1
August, 2022
1
July, 2025
Available data
266
fastq
261
bam
254
bigWig
126
bed narrowPeak
89
tsv
85
tagAlign
41
bed broadPeak
31
bigBed narrowPeak
28
bed bed3+
15
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
383
Homo sapiens
Biosample type
269
tissue
65
in vitro differentiated cells
56
primary cell
Organ
179
pancreas
120
connective tissue
55
adipose tissue
47
liver
26
epithelium
26
musculature of body
Project
390
AMP
Genome assembly (visualization)
258
hg19
231
GRCh38
Lab
390
AMP-T2D consortium
Audit category:
37
missing controlled_by
Audit category:
9
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
files.read_length!
50
BIOSAMPLE
ASSAY
390 results
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Clear Filters
ChIP-seq
total RNA-seq
WGBS
RRBS
DNase-seq
ATAC-seq
FAIRE-seq
tissue
islet of Langerhans
40
89
1
1
liver
41
3
1
subcutaneous abdominal adipose tissue
36
3
skeletal muscle tissue
22
4
pancreas
10
+ See 4 more…
in vitro differentiated cells
adipocyte
64
1
primary cell
skeletal muscle myoblast
15
1
2
pancreatic alpha cell
13
pancreatic beta cell
13
pancreatic endocrine cell
12
See all biosamples
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