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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 278ChIP-seq
  • 89total RNA-seq
  • 9WGBS
  • 6RRBS
  • 5DNase-seq
  • 2ATAC-seq
  • 1FAIRE-seq
Assay category
  • 278DNA binding
  • 89Transcription
  • 15DNA methylation
  • 8DNA accessibility
Target of assay
  • 190histone modification
  • 189histone
  • 102broad histone mark
  • 86narrow histone mark
  • 47control
  • 41transcription factor
  • 8RNA binding protein
  • 3chromatin remodeller
Date released
  • 699February, 2021
  • 399May, 2021
  • 390August, 2017
  • 353November, 2017
  • 341May, 2020
  • 319August, 2021
  • 314October, 2019
  • 218June, 2019
  • 205February, 2023
  • 168July, 2018
  • 161May, 2022
  • 120May, 2019
  • 108July, 2019
  • 83November, 2018
  • 80April, 2019
  • 76October, 2018
  • 73September, 2018
  • 64March, 2020
  • 61November, 2019
  • 58September, 2020
  • 49April, 2018
  • 47September, 2023
  • 46December, 2017
  • 40May, 2024
  • 39February, 2018
  • 34December, 2018
  • 25February, 2020
  • 22October, 2017
  • 20January, 2019
  • 19April, 2020
  • 16January, 2021
  • 16November, 2020
  • 15May, 2023
  • 10December, 2019
  • 7August, 2020
  • 6September, 2017
  • 5March, 2023
  • 4August, 2018
  • 4March, 2019
  • 4October, 2022
  • 3January, 2018
  • 3June, 2018
  • 1August, 2022
  • 1July, 2025
Available data
  • 266fastq
  • 261bam
  • 254bigWig
  • 126bed narrowPeak
  • 89tsv
  • 85tagAlign
  • 41bed broadPeak
  • 31bigBed narrowPeak
  • 28bed bed3+
  • 15bigBed broadPeak
  • 6bed bedMethyl
  • 6bigBed bedMethyl
Organism
  • 383Homo sapiens
Biosample type
  • 269tissue
  • 65in vitro differentiated cells
  • 56primary cell
Organ
  • 179pancreas
  • 120connective tissue
  • 55adipose tissue
  • 47liver
  • 26epithelium
  • 26musculature of body
Project
  • 390AMP
Genome assembly (visualization)
  • 258hg19
  • 231GRCh38
Lab
  • 390AMP-T2D consortium
Audit category:
  • 37missing controlled_by
Audit category:
  • 9inconsistent control read length
  • 3inconsistent assembly
  • 1inconsistent control run_type
files.read_length!
  • 50
BIOSAMPLE
ASSAY

390 results

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Clear Filters
ChIP-seq
total RNA-seq
WGBS
RRBS
DNase-seq
ATAC-seq
FAIRE-seq
tissue
islet of Langerhans408911
liver4131
subcutaneous abdominal adipose tissue363
skeletal muscle tissue224
pancreas10
in vitro differentiated cells
adipocyte641
primary cell
skeletal muscle myoblast1512
pancreatic alpha cell13
pancreatic beta cell13
pancreatic endocrine cell12
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