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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 66ChIP-seq
  • 9DNase-seq
  • 7WGBS
  • 1single cell RNA-seq
Assay category
  • 66DNA binding
  • 9DNA accessibility
  • 7DNA methylation
  • 1Transcription
Target of assay
  • 60transcription factor
  • 21RNA binding protein
  • 16recombinant protein
  • 7chromatin remodeller
  • 6control
  • 3other context
  • 3other post-translational modification
Date released
  • 699February, 2021
  • 399May, 2021
  • 390August, 2017
  • 353November, 2017
  • 341May, 2020
  • 319August, 2021
  • 314October, 2019
  • 218June, 2019
  • 205February, 2023
  • 168July, 2018
  • 161May, 2022
  • 120May, 2019
  • 108July, 2019
  • 83November, 2018
  • 80April, 2019
  • 76October, 2018
  • 73September, 2018
  • 64March, 2020
  • 61November, 2019
  • 58September, 2020
  • 49April, 2018
  • 47September, 2023
  • 46December, 2017
  • 40May, 2024
  • 39February, 2018
  • 34December, 2018
  • 25February, 2020
  • 22October, 2017
  • 20January, 2019
  • 19April, 2020
  • 16January, 2021
  • 16November, 2020
  • 15May, 2023
  • 10December, 2019
  • 7August, 2020
  • 6September, 2017
  • 5March, 2023
  • 4August, 2018
  • 4March, 2019
  • 4October, 2022
  • 3January, 2018
  • 3June, 2018
  • 1August, 2022
Available data
  • 83fastq
  • 82bam
  • 75bigWig
  • 68bed narrowPeak
  • 68bigBed narrowPeak
  • 9bed bed3+
  • 9bed broadPeak
  • 9bigBed broadPeak
  • 7bed bedMethyl
  • 7bigBed bedMethyl
  • 1csv
Organism
  • 83Homo sapiens
Biosample type
  • 61cell line
  • 21tissue
  • 1primary cell
Organ
  • 49liver
  • 15blood
  • 15bodily fluid
  • 9spleen
  • 6pancreas
  • 2brain
  • 1adipose tissue
  • 1connective tissue
Project
  • 83AMP
Genome assembly (visualization)
  • 75GRCh38
  • 66hg19
Lab
  • 83AMP-T2D consortium
Audit category:
  • 3missing controlled_by
Audit category:
  • 5inconsistent control read length
  • 4inconsistent control run_type
files.read_length!
  • 50
BIOSAMPLE
ASSAY

83 results

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Clear Filters
ChIP-seq
DNase-seq
WGBS
single cell RNA-seq
cell line
HepG2451
GM1287815
tissue
spleen612
body of pancreas22
brain2
liver2
pancreas2
primary cell
pancreatic cell1
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