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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 84RNA microarray
  • 62total RNA-seq
  • 12ATAC-seq
  • 1pCHi-C
Assay category
  • 62Transcription
  • 12DNA accessibility
Date released
  • 150February, 2021
  • 8February, 2023
  • 1May, 2021
Available data
  • 88txt
  • 66bam
  • 58bigWig
  • 58tsv
  • 8bed narrowPeak
  • 4bed bed3
Organism
  • 159Homo sapiens
Biosample type
  • 158tissue
  • 1primary cell
Organ
  • 891pancreas
  • 686liver
  • 679connective tissue
  • 489adipose tissue
  • 476epithelium
  • 393heart
  • 354kidney
  • 285brain
  • 236vasculature
  • 230blood vessel
  • 159bone element
  • 141artery
  • 122limb
  • 97musculature of body
  • 64blood
  • 64bodily fluid
  • 61eye
  • 43nerve
  • 31embryo
  • 25spleen
  • 22vein
  • 20lung
  • 18ureter
  • 16skeleton
  • 5gonad
  • 5ovary
  • 2intestine
  • 2pericardium
  • 2pituitary gland
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 158AMP
  • 1T1D
Genome assembly (visualization)
  • 70hg19
  • 66GRCh38
Lab
  • 158AMP-T2D consortium
  • 1Kyle Gaulton, UCSD
Audit category:
  • 84inconsistent ontology term
files.read_length!
  • 50
BIOSAMPLE
ASSAY

159 results

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RNA microarray
total RNA-seq
ATAC-seq
pCHi-C
tissue
bone element84
bone tissue58
acetabular part of hip bone11
ilium11
ischium11
primary cell
megakaryocyte1
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