Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 84RNA microarray
  • 62total RNA-seq
  • 12ATAC-seq
  • 1pCHi-C
Assay category
  • 62Transcription
  • 12DNA accessibility
Date released
  • 150February, 2021
  • 8February, 2023
  • 1May, 2021
Available data
  • 88txt
  • 66bam
  • 58bigWig
  • 58tsv
  • 8bed narrowPeak
  • 4bed bed3
Organism
  • 159Homo sapiens
Biosample type
  • 158tissue
  • 1primary cell
Organ
  • 891pancreas
  • 686liver
  • 679connective tissue
  • 489adipose tissue
  • 476epithelium
  • 393heart
  • 354kidney
  • 285brain
  • 236vasculature
  • 230blood vessel
  • 159bone element
  • 141artery
  • 122limb
  • 97musculature of body
  • 64blood
  • 64bodily fluid
  • 61eye
  • 43nerve
  • 31embryo
  • 25spleen
  • 22vein
  • 20lung
  • 18ureter
  • 16skeleton
  • 5gonad
  • 5ovary
  • 2intestine
  • 2pericardium
  • 2pituitary gland
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 158AMP
  • 1T1D
Genome assembly (visualization)
  • 70hg19
  • 66GRCh38
Lab
  • 158AMP-T2D consortium
  • 1Kyle Gaulton, UCSD
Audit category:
  • 84inconsistent ontology term
files.read_length!
  • 50
BIOSAMPLE
ASSAY

159 results

search-icontable-tab-icon
Clear Filters
RNA microarray
total RNA-seq
ATAC-seq
pCHi-C
tissue
bone element84
bone tissue58
acetabular part of hip bone11
ilium11
ischium11
pubis11
distal epiphysis1
distal epiphysis of femur1
distal epiphysis of humerus1
distal epiphysis of tibia1
proximal epiphysis1
proximal epiphysis of femur1
proximal epiphysis of humerus1
proximal epiphysis of tibia1
primary cell
megakaryocyte1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego