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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
ChIP-seq
9
DNase-seq
7
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
44
DNA binding
10
DNA accessibility
7
DNA methylation
1
Transcription
Target of assay
42
transcription factor
20
RNA binding protein
5
chromatin remodeller
2
control
Date released
715
February, 2021
399
May, 2021
379
August, 2017
341
May, 2020
335
November, 2017
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
80
April, 2019
73
December, 2017
73
September, 2018
64
March, 2020
62
November, 2018
61
November, 2019
55
September, 2020
49
April, 2018
47
October, 2018
47
September, 2023
40
May, 2024
39
February, 2018
33
December, 2018
25
February, 2020
23
October, 2017
19
April, 2020
18
January, 2019
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
62
fastq
61
bam
59
bigWig
52
bed narrowPeak
52
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
62
Homo sapiens
Biosample type
41
cell line
20
tissue
1
primary cell
Organ
36
liver
12
blood
12
bodily fluid
7
pancreas
3
spleen
2
brain
1
adipose tissue
1
connective tissue
Project
62
AMP
Genome assembly (visualization)
58
GRCh38
52
hg19
Lab
62
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
files.read_length!
76
BIOSAMPLE
ASSAY
62 results
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ChIP-seq
DNase-seq
WGBS
FAIRE-seq
single cell RNA-seq
cell line
HepG2
28
1
GM12878
12
tissue
liver
4
2
body of pancreas
2
2
pancreas
2
1
spleen
1
2
brain
2
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primary cell
pancreatic cell
1
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