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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 44ChIP-seq
  • 9DNase-seq
  • 7WGBS
  • 1FAIRE-seq
  • 1single cell RNA-seq
Assay category
  • 44DNA binding
  • 10DNA accessibility
  • 7DNA methylation
  • 1Transcription
Target of assay
  • 42transcription factor
  • 20RNA binding protein
  • 5chromatin remodeller
  • 2control
Date released
  • 715February, 2021
  • 399May, 2021
  • 379August, 2017
  • 341May, 2020
  • 335November, 2017
  • 319August, 2021
  • 314October, 2019
  • 218June, 2019
  • 205February, 2023
  • 200May, 2022
  • 168July, 2018
  • 120May, 2019
  • 108July, 2019
  • 80April, 2019
  • 73December, 2017
  • 73September, 2018
  • 64March, 2020
  • 62November, 2018
  • 61November, 2019
  • 55September, 2020
  • 49April, 2018
  • 47October, 2018
  • 47September, 2023
  • 40May, 2024
  • 39February, 2018
  • 33December, 2018
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 18January, 2019
  • 16January, 2021
  • 16November, 2020
  • 15May, 2023
  • 11September, 2017
  • 10December, 2019
  • 8January, 2018
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
Available data
  • 62fastq
  • 61bam
  • 59bigWig
  • 52bed narrowPeak
  • 52bigBed narrowPeak
  • 9bed bed3+
  • 9bed broadPeak
  • 9bigBed broadPeak
  • 7bed bedMethyl
  • 7bigBed bedMethyl
  • 1csv
Organism
  • 62Homo sapiens
Biosample type
  • 41cell line
  • 20tissue
  • 1primary cell
Organ
  • 36liver
  • 12blood
  • 12bodily fluid
  • 7pancreas
  • 3spleen
  • 2brain
  • 1adipose tissue
  • 1connective tissue
Project
  • 62AMP
Genome assembly (visualization)
  • 58GRCh38
  • 52hg19
Lab
  • 62AMP-T2D consortium
Audit category:
  • 2missing controlled_by
Audit category:
  • 5inconsistent control read length
  • 4inconsistent control run_type
files.read_length!
  • 76
BIOSAMPLE
ASSAY

62 results

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Clear Filters
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
single cell RNA-seq
cell line
HepG2281
GM1287812
tissue
liver42
body of pancreas22
pancreas21
spleen12
brain2
primary cell
pancreatic cell1
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