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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 50ChIP-seq
  • 8snATAC-seq
  • 1ATAC-seq
Assay category
  • 50DNA binding
  • 9DNA accessibility
Target of assay
  • 43transcription factor
  • 5RNA binding protein
  • 5control
  • 2chromatin remodeller
Date released
  • 25December, 2018
  • 13January, 2019
  • 12November, 2018
  • 8January, 2021
  • 1January, 2018
Available data
  • 50bam
  • 50fastq
  • 46bigWig
  • 45bed narrowPeak
  • 45bigBed narrowPeak
Organism
  • 59Homo sapiens
Biosample type
  • 51cell line
  • 8primary cell
Organ
  • 916pancreas
  • 682liver
  • 644connective tissue
  • 499epithelium
  • 482adipose tissue
  • 393heart
  • 354kidney
  • 286brain
  • 236vasculature
  • 230blood vessel
  • 159bone element
  • 141artery
  • 122limb
  • 96musculature of body
  • 61eye
  • 59blood
  • 59bodily fluid
  • 43nerve
  • 37embryo
  • 22vein
  • 20lung
  • 18ureter
  • 16skeleton
  • 12spleen
  • 5gonad
  • 5ovary
  • 2intestine
  • 2pericardium
  • 2pituitary gland
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 51AMP
  • 8T1D
Genome assembly (visualization)
  • 46hg19
  • 45GRCh38
Lab
  • 51AMP-T2D consortium
  • 8Kyle Gaulton, UCSD
files.read_length!
  • 76
BIOSAMPLE
ASSAY

59 results

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Clear Filters
ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878501
primary cell
peripheral blood mononuclear cell8
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