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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 102ChIP-seq
Assay category
  • 102DNA binding
Target of assay
  • 951histone modification
  • 950histone
  • 485narrow histone mark
  • 464broad histone mark
  • 409transcription factor
  • 321control
  • 102RNA binding protein
  • 25chromatin remodeller
  • 19recombinant protein
  • 5nucleotide modification
  • 2other context
  • 2other post-translational modification
Date released
  • 37November, 2017
  • 20November, 2018
  • 10October, 2018
  • 5May, 2019
  • 5May, 2021
  • 5May, 2024
  • 4April, 2019
  • 4August, 2017
  • 4June, 2019
  • 2December, 2017
  • 2December, 2018
  • 2January, 2019
  • 1August, 2021
  • 1November, 2019
Available data
  • 94bigWig
  • 93bed narrowPeak
  • 91bam
  • 85bigBed narrowPeak
  • 77fastq
  • 9bed broadPeak
  • 9bigBed broadPeak
  • 2bed bed3+
  • 1tar
Organism
  • 102Homo sapiens
Biosample type
  • 60cell line
  • 27tissue
  • 10primary cell
  • 5in vitro differentiated cells
Organ
  • 56liver
  • 11heart
  • 8pancreas
  • 6connective tissue
  • 6epithelium
  • 5adipose tissue
  • 5blood
  • 5bodily fluid
  • 5vasculature
  • 4blood vessel
  • 3brain
  • 3kidney
  • 1artery
  • 1eye
Project
  • 102AMP
Genome assembly (visualization)
  • 88GRCh38
  • 88hg19
Lab
  • 91AMP-T2D consortium
  • 5Kyle Gaulton, UCSD
  • 5Patrick T. Ellinor, Broad
  • 1Bing Ren, UCSD
Audit category:
  • 4inconsistent ontology term
Audit category:
  • 3missing controlled_by
Audit category:
  • 6inconsistent control read length
  • 3inconsistent control run_type
files.read_length!
  • 76
BIOSAMPLE
ASSAY

102 results

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Clear Filters
ChIP-seq
cell line
HepG254
GM128785
EndoC_BH11
tissue
left cardiac atrium5
body of pancreas4
heart left ventricle3
omental fat pad3
islet of Langerhans2
primary cell
skeletal muscle myoblast2
astrocyte of the cerebellum1
brain microvascular endothelial cell1
cardiac fibroblast1
cardiac muscle cell1
in vitro differentiated cells
embryonic stem cell5
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