Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 12ATAC-seq
  • 4total RNA-seq
Assay category
  • 12DNA accessibility
  • 4Transcription
Date released
  • 8February, 2021
  • 8February, 2023
Available data
  • 8bam
  • 8bed narrowPeak
  • 4bed bed3
  • 4txt
Organism
  • 16Homo sapiens
Biosample type
  • 16tissue
Organ
  • 946pancreas
  • 791liver
  • 684connective tissue
  • 524epithelium
  • 491adipose tissue
  • 393heart
  • 354kidney
  • 286brain
  • 236vasculature
  • 230blood vessel
  • 159bone element
  • 141artery
  • 122limb
  • 97musculature of body
  • 69blood
  • 69bodily fluid
  • 61eye
  • 43nerve
  • 37embryo
  • 25spleen
  • 22vein
  • 20lung
  • 18ureter
  • 16skeleton
  • 5gonad
  • 5ovary
  • 2intestine
  • 2pericardium
  • 2pituitary gland
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 16AMP
Genome assembly (visualization)
  • 12hg19
  • 8GRCh38
Lab
  • 16AMP-T2D consortium
files.read_length!
  • 98
BIOSAMPLE
ASSAY

16 results

search-icontable-tab-icon
Clear Filters
ATAC-seq
total RNA-seq
tissue
acetabular part of hip bone11
ilium11
ischium11
pubis11
distal epiphysis1
distal epiphysis of femur1
distal epiphysis of humerus1
distal epiphysis of tibia1
proximal epiphysis1
proximal epiphysis of femur1
proximal epiphysis of humerus1
proximal epiphysis of tibia1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego