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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 126ChIP-seq
  • 26ATAC-seq
  • 6WGBS
  • 6total RNA-seq
Assay category
  • 126DNA binding
  • 26DNA accessibility
  • 6DNA methylation
  • 6Transcription
Target of assay
  • 97transcription factor
  • 26control
  • 18RNA binding protein
  • 3chromatin remodeller
Date released
  • 39November, 2017
  • 32December, 2018
  • 27October, 2018
  • 24May, 2022
  • 16November, 2018
  • 8January, 2019
  • 6February, 2021
  • 6October, 2017
  • 4December, 2017
  • 2August, 2017
Available data
  • 164fastq
  • 158bam
  • 126bed narrowPeak
  • 108bigWig
  • 102bigBed narrowPeak
  • 6tsv
  • 6txt
Organism
  • 164Homo sapiens
Biosample type
  • 88cell line
  • 70tissue
  • 6primary cell
Organ
  • 48liver
  • 47pancreas
  • 45blood
  • 45bodily fluid
  • 16adipose tissue
  • 16connective tissue
  • 8spleen
  • 6epithelium
Project
  • 158AMP
  • 6HPAP
Genome assembly (visualization)
  • 126hg19
  • 108GRCh38
Lab
  • 134AMP-T2D consortium
  • 24Kyle Gaulton, UCSD
  • 6Klaus Kaestner, Upenn
BIOSAMPLE
ASSAY

164 results

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Clear Filters
ChIP-seq
ATAC-seq
WGBS
total RNA-seq
cell line
GM1287845
HepG243
tissue
islet of Langerhans186
body of pancreas134
subcutaneous adipose tissue81
spleen71
omental fat pad61
primary cell
pancreatic alpha cell6
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