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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 31total RNA-seq
  • 28single cell RNA-seq
  • 7ChIP-seq
  • 5WGBS
Assay category
  • 59Transcription
  • 7DNA binding
  • 5DNA methylation
Target of assay
  • 7transcription factor
Date released
  • 18September, 2020
  • 17April, 2018
  • 15February, 2018
  • 11August, 2017
  • 8July, 2018
  • 1June, 2018
  • 1November, 2018
Available data
  • 69fastq
  • 51bam
  • 51bigWig
  • 41tsv
  • 3bed bedMethyl
  • 3bigBed bedMethyl
  • 2bed bed3+
  • 2zippedFastqFolder
Organism
  • 71Homo sapiens
Biosample type
  • 44primary cell
  • 15in vitro differentiated cells
  • 12tissue
Organ
  • 35pancreas
  • 34epithelium
  • 10adipose tissue
  • 10connective tissue
  • 4embryo
  • 1liver
Project
  • 53AMP
  • 18HPAP
Genome assembly (visualization)
  • 51GRCh38
  • 48hg19
Lab
  • 53AMP-T2D consortium
  • 18Klaus Kaestner, Upenn
Audit category:
  • 7missing controlled_by
BIOSAMPLE
ASSAY

71 results

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Clear Filters
total RNA-seq
single cell RNA-seq
ChIP-seq
WGBS
primary cell
pancreatic alpha cell154
pancreatic beta cell14
mesenchymal cell4
pancreatic cell4
pancreatic delta cell3
in vitro differentiated cells
pancreatic endoderm4
definitive endodermal cell2
embryonic stem cell2
endocrine cell2
posterior foregut2
tissue
white adipose tissue7
adipose tissue3
liver1
pancreas1
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