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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
126
ChIP-seq
37
total RNA-seq
28
single cell RNA-seq
24
ATAC-seq
7
WGBS
Assay category
126
DNA binding
65
Transcription
24
DNA accessibility
7
DNA methylation
Target of assay
97
transcription factor
26
control
18
RNA binding protein
3
chromatin remodeller
Date released
39
November, 2017
32
December, 2018
27
October, 2018
24
May, 2022
18
September, 2020
17
April, 2018
17
November, 2018
15
February, 2018
August, 2017
8
January, 2019
8
July, 2018
6
February, 2021
6
October, 2017
4
December, 2017
1
June, 2018
Available data
220
fastq
198
bam
148
bigWig
124
bed narrowPeak
100
bigBed narrowPeak
47
tsv
6
txt
2
zippedFastqFolder
1
bed bedMethyl
1
bigBed bedMethyl
Organism
222
Homo sapiens
Biosample type
88
cell line
69
tissue
50
primary cell
15
in vitro differentiated cells
Organ
82
pancreas
47
liver
45
blood
45
bodily fluid
40
epithelium
15
adipose tissue
15
connective tissue
8
spleen
4
embryo
Project
198
AMP
24
HPAP
Genome assembly (visualization)
165
hg19
148
GRCh38
Lab
174
AMP-T2D consortium
24
Klaus Kaestner, Upenn
24
Kyle Gaulton, UCSD
month_released!
August, 2017
BIOSAMPLE
ASSAY
222 results
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ChIP-seq
total RNA-seq
single cell RNA-seq
ATAC-seq
WGBS
cell line
GM12878
45
HepG2
43
tissue
islet of Langerhans
6
18
body of pancreas
13
4
spleen
7
1
subcutaneous adipose tissue
8
omental fat pad
6
1
+ See 2 more…
primary cell
pancreatic alpha cell
15
4
6
pancreatic beta cell
1
4
mesenchymal cell
4
pancreatic cell
4
pancreatic delta cell
3
+ See 4 more…
in vitro differentiated cells
pancreatic endoderm
4
definitive endodermal cell
2
embryonic stem cell
2
endocrine cell
2
posterior foregut
2
+ See 2 more…
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