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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 126ChIP-seq
  • 37total RNA-seq
  • 28single cell RNA-seq
  • 24ATAC-seq
  • 1WGBS
Assay category
  • 126DNA binding
  • 65Transcription
  • 24DNA accessibility
  • 1DNA methylation
Target of assay
  • 97transcription factor
  • 26control
  • 18RNA binding protein
  • 3chromatin remodeller
Date released
  • 39November, 2017
  • 32December, 2018
  • 27October, 2018
  • 24May, 2022
  • 18September, 2020
  • 17April, 2018
  • 17November, 2018
  • 15February, 2018
  • August, 2017
  • 8January, 2019
  • 8July, 2018
  • 6October, 2017
  • 4December, 2017
  • 1June, 2018
Available data
  • 214fastq
  • 198bam
  • 148bigWig
  • 124bed narrowPeak
  • 100bigBed narrowPeak
  • 41tsv
  • 6txt
  • 2zippedFastqFolder
  • 1bed bedMethyl
  • 1bigBed bedMethyl
Organism
  • 216Homo sapiens
Biosample type
  • 88cell line
  • 69tissue
  • 44primary cell
  • 15in vitro differentiated cells
Organ
  • 76pancreas
  • 47liver
  • 45blood
  • 45bodily fluid
  • 34epithelium
  • 15adipose tissue
  • 15connective tissue
  • 8spleen
  • 4embryo
Project
  • 198AMP
  • 18HPAP
Genome assembly (visualization)
  • 165hg19
  • 148GRCh38
Lab
  • 174AMP-T2D consortium
  • 24Kyle Gaulton, UCSD
  • 18Klaus Kaestner, Upenn
month_released!
  • August, 2017
BIOSAMPLE
ASSAY

216 results

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Clear Filters
ChIP-seq
total RNA-seq
single cell RNA-seq
ATAC-seq
WGBS
cell line
GM1287845
HepG243
tissue
islet of Langerhans618
body of pancreas134
spleen71
subcutaneous adipose tissue8
omental fat pad61
primary cell
pancreatic alpha cell154
pancreatic beta cell14
mesenchymal cell4
pancreatic cell4
pancreatic delta cell3
in vitro differentiated cells
pancreatic endoderm4
definitive endodermal cell2
embryonic stem cell2
endocrine cell2
posterior foregut2
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