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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
101
ChIP-seq
37
total RNA-seq
28
single cell RNA-seq
26
ATAC-seq
11
WGBS
Assay category
101
DNA binding
65
Transcription
26
DNA accessibility
11
DNA methylation
Target of assay
78
transcription factor
22
control
16
RNA binding protein
3
chromatin remodeller
Date released
39
November, 2017
December, 2018
27
October, 2018
24
May, 2022
18
September, 2020
17
April, 2018
17
November, 2018
15
February, 2018
13
August, 2017
8
January, 2019
8
July, 2018
6
February, 2021
6
October, 2017
4
December, 2017
1
June, 2018
Available data
201
fastq
177
bam
131
bigWig
98
bed narrowPeak
74
bigBed narrowPeak
47
tsv
6
txt
3
bed bedMethyl
3
bigBed bedMethyl
2
bed bed3+
2
zippedFastqFolder
Organism
203
Homo sapiens
Biosample type
75
tissue
63
cell line
50
primary cell
15
in vitro differentiated cells
Organ
82
pancreas
49
liver
40
epithelium
26
adipose tissue
26
connective tissue
20
blood
20
bodily fluid
4
embryo
1
spleen
Project
179
AMP
24
HPAP
Genome assembly (visualization)
146
hg19
131
GRCh38
Lab
155
AMP-T2D consortium
24
Klaus Kaestner, Upenn
24
Kyle Gaulton, UCSD
Audit category:
7
missing controlled_by
month_released!
December, 2018
BIOSAMPLE
ASSAY
203 results
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Clear Filters
ChIP-seq
total RNA-seq
single cell RNA-seq
ATAC-seq
WGBS
tissue
islet of Langerhans
6
18
body of pancreas
13
4
subcutaneous adipose tissue
8
1
omental fat pad
6
1
white adipose tissue
7
+ See 5 more…
cell line
HepG2
43
GM12878
20
primary cell
pancreatic alpha cell
15
4
6
pancreatic beta cell
1
4
mesenchymal cell
4
pancreatic cell
4
pancreatic delta cell
3
+ See 4 more…
in vitro differentiated cells
pancreatic endoderm
4
definitive endodermal cell
2
embryonic stem cell
2
endocrine cell
2
posterior foregut
2
+ See 2 more…
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