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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
112
ChIP-seq
37
total RNA-seq
28
single cell RNA-seq
24
ATAC-seq
8
WGBS
Assay category
112
DNA binding
65
Transcription
24
DNA accessibility
8
DNA methylation
Target of assay
92
transcription factor
17
control
13
RNA binding protein
3
chromatin remodeller
Date released
39
November, 2017
32
December, 2018
24
May, 2022
18
September, 2020
17
April, 2018
17
November, 2018
15
February, 2018
13
October, 2018
8
January, 2019
8
July, 2018
6
February, 2021
5
October, 2017
4
December, 2017
2
August, 2017
1
June, 2018
Available data
207
fastq
184
bam
143
bigWig
119
bed narrowPeak
96
bigBed narrowPeak
47
tsv
6
txt
2
zippedFastqFolder
1
bed bedMethyl
1
bigBed bedMethyl
Organism
209
Homo sapiens
Biosample type
88
cell line
56
tissue
50
primary cell
15
in vitro differentiated cells
Organ
82
pancreas
49
liver
45
blood
45
bodily fluid
40
epithelium
26
adipose tissue
connective tissue
8
spleen
4
embryo
Project
185
AMP
24
HPAP
Genome assembly (visualization)
160
hg19
143
GRCh38
Lab
161
AMP-T2D consortium
24
Klaus Kaestner, Upenn
24
Kyle Gaulton, UCSD
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
209 results
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Clear Filters
ChIP-seq
total RNA-seq
single cell RNA-seq
ATAC-seq
WGBS
cell line
GM12878
45
HepG2
43
tissue
islet of Langerhans
6
18
body of pancreas
13
4
spleen
7
1
right lobe of liver
4
1
liver
1
+ See 1 more…
primary cell
pancreatic alpha cell
15
4
6
pancreatic beta cell
1
4
mesenchymal cell
4
pancreatic cell
4
pancreatic delta cell
3
+ See 4 more…
in vitro differentiated cells
pancreatic endoderm
4
definitive endodermal cell
2
embryonic stem cell
2
endocrine cell
2
posterior foregut
2
+ See 2 more…
See all biosamples
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