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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
133
ChIP-seq
33
total RNA-seq
28
single cell RNA-seq
26
ATAC-seq
11
WGBS
Assay category
133
DNA binding
61
Transcription
26
DNA accessibility
11
DNA methylation
Target of assay
104
transcription factor
26
control
18
RNA binding protein
3
chromatin remodeller
Date released
39
November, 2017
32
December, 2018
27
October, 2018
24
May, 2022
18
September, 2020
17
April, 2018
17
November, 2018
13
August, 2017
11
February, 2018
8
January, 2019
8
July, 2018
6
February, 2021
6
October, 2017
4
December, 2017
1
June, 2018
Available data
229
fastq
205
bam
155
bigWig
126
bed narrowPeak
102
bigBed narrowPeak
43
tsv
6
txt
3
bed bedMethyl
3
bigBed bedMethyl
2
bed bed3+
2
zippedFastqFolder
Organism
231
Homo sapiens
Biosample type
88
cell line
82
tissue
50
primary cell
11
in vitro differentiated cells
Organ
82
pancreas
49
liver
45
blood
45
bodily fluid
40
epithelium
26
adipose tissue
26
connective tissue
8
spleen
embryo
Project
207
AMP
24
HPAP
Genome assembly (visualization)
170
hg19
155
GRCh38
Lab
183
AMP-T2D consortium
24
Klaus Kaestner, Upenn
24
Kyle Gaulton, UCSD
Audit category:
7
missing controlled_by
organ_slims!
embryo
BIOSAMPLE
ASSAY
231 results
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Clear Filters
ChIP-seq
total RNA-seq
single cell RNA-seq
ATAC-seq
WGBS
cell line
GM12878
45
HepG2
43
tissue
islet of Langerhans
6
18
body of pancreas
13
4
subcutaneous adipose tissue
8
1
spleen
7
1
omental fat pad
6
1
+ See 5 more…
primary cell
pancreatic alpha cell
15
4
6
pancreatic beta cell
1
4
mesenchymal cell
4
pancreatic cell
4
pancreatic delta cell
3
+ See 4 more…
in vitro differentiated cells
definitive endodermal cell
2
embryonic stem cell
2
endocrine cell
2
posterior foregut
2
primitive gut cell
2
+ See 1 more…
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