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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 22ATAC-seq
  • 22total RNA-seq
  • 18single cell RNA-seq
  • 13ChIP-seq
  • 7WGBS
Assay category
  • 40Transcription
  • 22DNA accessibility
  • 13DNA binding
  • 7DNA methylation
Target of assay
  • 8transcription factor
  • 5control
  • 4RNA binding protein
Date released
  • 24May, 2022
  • 16September, 2020
  • 13October, 2018
  • 11April, 2018
  • 6February, 2021
  • 6July, 2018
  • 4October, 2017
  • 1June, 2018
  • 1November, 2018
Available data
  • 82fastq
  • 60bam
  • 31bigWig
  • 30bed narrowPeak
  • 24tsv
  • 8bigBed narrowPeak
  • 6txt
  • 1bed bedMethyl
  • 1bigBed bedMethyl
Organism
  • 82Homo sapiens
Biosample type
  • 42tissue
  • 40primary cell
Organ
  • 82pancreas
  • 49liver
  • 45blood
  • 45bodily fluid
  • 40epithelium
  • 26adipose tissue
  • 26connective tissue
  • 8spleen
  • 4embryo
Project
  • 60AMP
  • 22HPAP
Genome assembly (visualization)
  • 48hg19
  • 31GRCh38
Lab
  • 36AMP-T2D consortium
  • 24Kyle Gaulton, UCSD
  • 22Klaus Kaestner, Upenn
BIOSAMPLE
ASSAY

82 results

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ATAC-seq
total RNA-seq
single cell RNA-seq
ChIP-seq
WGBS
tissue
islet of Langerhans186
body of pancreas413
pancreas1
primary cell
pancreatic alpha cell1546
pancreatic beta cell14
pancreatic delta cell3
pancreatic ductal cell3
pancreatic polypeptide-secreting cell3
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