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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
total RNA-seq
29
ChIP-seq
28
single cell RNA-seq
26
ATAC-seq
11
WGBS
Assay category
65
Transcription
29
DNA binding
26
DNA accessibility
11
DNA methylation
Target of assay
transcription factor
26
control
18
RNA binding protein
3
chromatin remodeller
Date released
24
May, 2022
18
September, 2020
17
April, 2018
15
February, 2018
14
October, 2018
8
July, 2018
6
August, 2017
6
December, 2018
6
February, 2021
6
October, 2017
5
November, 2017
3
November, 2018
2
December, 2017
1
June, 2018
Available data
129
fastq
105
bam
55
bigWig
47
tsv
29
bed narrowPeak
6
txt
5
bigBed narrowPeak
3
bed bedMethyl
3
bigBed bedMethyl
2
zippedFastqFolder
Organism
131
Homo sapiens
Biosample type
57
tissue
50
primary cell
15
in vitro differentiated cells
9
cell line
Organ
74
pancreas
40
epithelium
14
adipose tissue
14
connective tissue
9
liver
5
spleen
4
blood
4
bodily fluid
4
embryo
Project
107
AMP
24
HPAP
Genome assembly (visualization)
70
hg19
55
GRCh38
Lab
83
AMP-T2D consortium
24
Klaus Kaestner, Upenn
24
Kyle Gaulton, UCSD
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
131 results
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total RNA-seq
ChIP-seq
single cell RNA-seq
ATAC-seq
WGBS
tissue
islet of Langerhans
6
18
body of pancreas
5
4
subcutaneous adipose tissue
6
1
spleen
4
1
omental fat pad
3
1
+ See 4 more…
primary cell
pancreatic alpha cell
15
4
6
pancreatic beta cell
1
4
mesenchymal cell
4
pancreatic cell
4
pancreatic delta cell
3
+ See 4 more…
in vitro differentiated cells
pancreatic endoderm
4
definitive endodermal cell
2
embryonic stem cell
2
endocrine cell
2
posterior foregut
2
+ See 2 more…
cell line
HepG2
5
GM12878
4
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