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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 193total RNA-seq
  • 3ChIP-seq
  • 1DNase-seq
  • 1WGBS
Assay category
  • 193Transcription
  • 3DNA binding
  • 1DNA accessibility
  • 1DNA methylation
Target of assay
  • 3transcription factor
Date released
  • 93August, 2017
  • 76February, 2023
  • 26September, 2018
  • 2October, 2018
  • 1November, 2018
Available data
  • 198fastq
  • 122bam
  • 122bigWig
  • 117tsv
  • 1bed bedMethyl
  • 1bed broadPeak
  • 1bed narrowPeak
  • 1bigBed bedMethyl
  • 1bigBed broadPeak
  • 1bigBed narrowPeak
Organism
  • 198Homo sapiens
Biosample type
  • 105primary cell
  • 93tissue
Organ
  • 155pancreas
  • 65epithelium
  • 3adipose tissue
  • 3connective tissue
Project
  • 122AMP
  • 76HPAP
Genome assembly (visualization)
  • 121GRCh38
  • 121hg19
Lab
  • 122AMP-T2D consortium
  • 76Klaus Kaestner, Upenn
Audit category:
  • 3missing controlled_by
files.read_length!
  • 100
BIOSAMPLE
ASSAY

198 results

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Clear Filters
total RNA-seq
ChIP-seq
DNase-seq
WGBS
primary cell
exocrine cell39
pancreatic alpha cell37
pancreatic beta cell20
pancreatic acinar cell4
pancreatic ductal cell4
tissue
islet of Langerhans89
white adipose tissue3
pancreas1
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