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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
82
total RNA-seq
3
ChIP-seq
1
DNase-seq
1
WGBS
Assay category
82
Transcription
3
DNA binding
1
DNA accessibility
1
DNA methylation
Target of assay
3
transcription factor
Date released
76
February, 2023
6
February, 2018
4
August, 2017
1
November, 2018
Available data
87
fastq
11
bam
11
bigWig
6
tsv
1
bed bedMethyl
1
bed broadPeak
1
bed narrowPeak
1
bigBed bedMethyl
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
87
Homo sapiens
Biosample type
77
primary cell
6
in vitro differentiated cells
4
tissue
Organ
38
pancreas
37
epithelium
3
adipose tissue
3
connective tissue
1
embryo
Project
76
HPAP
11
AMP
Genome assembly (visualization)
10
GRCh38
10
hg19
Lab
76
Klaus Kaestner, Upenn
11
AMP-T2D consortium
Audit category:
3
missing controlled_by
BIOSAMPLE
ASSAY
87 results
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total RNA-seq
ChIP-seq
DNase-seq
WGBS
primary cell
exocrine cell
39
pancreatic alpha cell
27
pancreatic beta cell
10
skeletal muscle myoblast
1
in vitro differentiated cells
definitive endodermal cell
1
embryonic stem cell
1
endocrine cell
1
pancreatic endoderm
1
posterior foregut
1
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tissue
white adipose tissue
3
pancreas
1
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