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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 199total RNA-seq
  • 6ChIP-seq
  • 1DNase-seq
Assay category
  • 199Transcription
  • 6DNA binding
  • 1DNA accessibility
Target of assay
  • 6transcription factor
Date released
  • 93August, 2017
  • 76February, 2023
  • 26September, 2018
  • 6February, 2018
  • November, 2018
  • 2November, 2017
  • 2October, 2018
  • 1December, 2018
Available data
  • 206fastq
  • 130bam
  • 130bigWig
  • 123tsv
  • 4bed narrowPeak
  • 4bigBed narrowPeak
  • 1bed broadPeak
  • 1bigBed broadPeak
Organism
  • 206Homo sapiens
Biosample type
  • 105primary cell
  • 92tissue
  • 6in vitro differentiated cells
  • 3cell line
Organ
  • 154pancreas
  • 65epithelium
  • 3adipose tissue
  • 3connective tissue
  • 2liver
  • 1blood
  • 1bodily fluid
  • 1embryo
Project
  • 130AMP
  • 76HPAP
Genome assembly (visualization)
  • 130hg19
  • 129GRCh38
Lab
  • 130AMP-T2D consortium
  • 76Klaus Kaestner, Upenn
Audit category:
  • 3missing controlled_by
month_released!
  • November, 2018
BIOSAMPLE
ASSAY

206 results

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total RNA-seq
ChIP-seq
DNase-seq
primary cell
exocrine cell39
pancreatic alpha cell37
pancreatic beta cell20
pancreatic acinar cell4
pancreatic ductal cell4
tissue
islet of Langerhans89
white adipose tissue3
in vitro differentiated cells
definitive endodermal cell1
embryonic stem cell1
endocrine cell1
pancreatic endoderm1
posterior foregut1
cell line
HepG22
GM128781
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