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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
total RNA-seq
10
ChIP-seq
1
DNase-seq
Assay category
45
Transcription
10
DNA binding
1
DNA accessibility
Target of assay
10
transcription factor
1
RNA binding protein
Date released
39
February, 2023
6
February, 2018
4
August, 2017
4
November, 2018
2
November, 2017
1
December, 2018
Available data
56
fastq
17
bam
17
bigWig
8
bed narrowPeak
8
bigBed narrowPeak
6
tsv
1
bed broadPeak
1
bigBed broadPeak
Organism
56
Homo sapiens
Biosample type
40
primary cell
7
cell line
6
in vitro differentiated cells
3
tissue
Organ
pancreas
106
epithelium
4
blood
4
bodily fluid
3
adipose tissue
3
connective tissue
3
liver
1
embryo
Project
39
HPAP
17
AMP
Genome assembly (visualization)
17
hg19
16
GRCh38
Lab
39
Klaus Kaestner, Upenn
17
AMP-T2D consortium
Audit category:
3
missing controlled_by
organ_slims!
pancreas
BIOSAMPLE
ASSAY
56 results
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total RNA-seq
ChIP-seq
DNase-seq
primary cell
exocrine cell
39
skeletal muscle myoblast
1
cell line
GM12878
4
HepG2
3
in vitro differentiated cells
definitive endodermal cell
1
embryonic stem cell
1
endocrine cell
1
pancreatic endoderm
1
posterior foregut
1
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tissue
white adipose tissue
3
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