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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 9DNase-seq
  • 8ChIP-seq
Assay category
  • 9DNA accessibility
  • 8DNA binding
Target of assay
  • 8chromatin remodeller
  • 8transcription factor
  • 3RNA binding protein
Date released
  • 12November, 2018
  • 4November, 2017
  • 1August, 2017
Available data
  • 17bam
  • 17bed narrowPeak
  • 17bigBed narrowPeak
  • 17bigWig
  • 17fastq
  • 9bed broadPeak
  • 9bigBed broadPeak
  • 8bed bed3+
Organism
  • 17Homo sapiens
Biosample type
  • 8cell line
  • 8tissue
  • 1in vitro differentiated cells
Organ
  • 11liver
  • 2connective tissue
  • 2pancreas
  • 1adipose tissue
  • 1brain
  • 1spleen
Project
  • 17AMP
Genome assembly (visualization)
  • 17hg19
  • 15GRCh38
Lab
  • 17AMP-T2D consortium
Audit category:
  • 6missing controlled_by
Audit category:
  • 8inconsistent control run_type
  • 7inconsistent control read length
files.run_type!
  • single-ended
BIOSAMPLE
ASSAY

17 results

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Clear Filters
DNase-seq
ChIP-seq
cell line
HepG28
tissue
body of pancreas2
liver2
brain1
omental fat pad1
right lobe of liver1
in vitro differentiated cells
adipocyte1
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