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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
10
DNase-seq
Assay category
10
DNA accessibility
10
DNA binding
Target of assay
8
chromatin remodeller
8
transcription factor
3
RNA binding protein
2
histone
2
histone modification
2
narrow histone mark
Date released
12
November, 2018
5
November, 2017
3
August, 2017
Available data
20
bam
20
bed narrowPeak
20
bigBed narrowPeak
20
bigWig
20
fastq
10
bed broadPeak
10
bigBed broadPeak
8
bed bed3+
Organism
20
Homo sapiens
Biosample type
9
cell line
8
tissue
2
primary cell
1
in vitro differentiated cells
Organ
12
liver
2
connective tissue
2
pancreas
1
adipose tissue
1
brain
1
spleen
Project
20
AMP
Genome assembly (visualization)
20
hg19
17
GRCh38
Lab
20
AMP-T2D consortium
Audit category:
7
missing controlled_by
Audit category:
9
inconsistent control run_type
8
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
20 results
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ChIP-seq
DNase-seq
cell line
HepG2
9
tissue
body of pancreas
2
liver
2
brain
1
omental fat pad
1
right lobe of liver
1
+ See 1 more…
primary cell
skeletal muscle myoblast
1
1
in vitro differentiated cells
adipocyte
1
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