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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ChIP-seq
4
RRBS
2
DNase-seq
Assay category
64
DNA binding
4
DNA methylation
2
DNA accessibility
Target of assay
43
histone
43
histone modification
23
broad histone mark
20
narrow histone mark
17
control
4
transcription factor
3
RNA binding protein
1
chromatin remodeller
Date released
114
November, 2017
70
August, 2017
26
December, 2017
22
February, 2018
16
November, 2018
9
October, 2017
6
September, 2017
1
January, 2019
Available data
70
fastq
66
bam
50
bigWig
48
bed narrowPeak
26
bigBed narrowPeak
21
bed broadPeak
19
tagAlign
15
bigBed broadPeak
12
bed bed3+
4
bed bedMethyl
4
bigBed bedMethyl
Organism
63
Homo sapiens
Biosample type
39
primary cell
30
tissue
1
in vitro differentiated cells
Organ
44
pancreas
22
epithelium
4
liver
3
connective tissue
2
adipose tissue
2
musculature of body
Project
70
AMP
Genome assembly (visualization)
54
hg19
47
GRCh38
Lab
70
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
3
inconsistent assembly
2
inconsistent control read length
1
inconsistent control run_type
BIOSAMPLE
ASSAY
70 results
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ChIP-seq
RRBS
DNase-seq
primary cell
skeletal muscle myoblast
15
1
1
pancreatic alpha cell
11
pancreatic beta cell
11
tissue
islet of Langerhans
12
pancreas
10
liver
3
1
adipose tissue
2
skeletal muscle tissue
2
in vitro differentiated cells
adipocyte
1
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