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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 49ChIP-seq
Assay category
  • 49DNA binding
Target of assay
  • 100transcription factor
  • 95histone
  • 95histone modification
  • 54control
  • 49broad histone mark
  • 46narrow histone mark
  • 22RNA binding protein
  • 17chromatin remodeller
  • 2other context
  • 2other post-translational modification
Date released
  • 23August, 2017
  • 8November, 2017
  • 7February, 2018
  • 6October, 2017
  • 5December, 2017
Available data
  • 49fastq
  • 48bam
  • 48bigWig
  • 46bed narrowPeak
  • 23bigBed narrowPeak
  • 22tagAlign
  • 20bed broadPeak
  • 14bigBed broadPeak
  • 11bed bed3+
Organism
  • 45Homo sapiens
Biosample type
  • 17tissue
  • 12primary cell
  • 11in vitro differentiated cells
  • 8cell line
  • 1stem cell
Organ
  • 17pancreas
  • 8liver
  • 6brain
  • 6epithelium
  • 4embryo
Project
  • 49AMP
Genome assembly (visualization)
  • 48hg19
  • 47GRCh38
Lab
  • 49AMP-T2D consortium
Audit category:
  • 4missing controlled_by
Audit category:
  • 11inconsistent control read length
  • 2inconsistent assembly
BIOSAMPLE
ASSAY

49 results

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Clear Filters
ChIP-seq
tissue
brain6
islet of Langerhans6
pancreas5
primary cell
skeletal muscle myoblast6
pancreatic alpha cell3
pancreatic beta cell3
in vitro differentiated cells
pancreatic endoderm4
primitive gut cell2
Posterior foregut1
definitive endodermal cell1
embryonic stem cell1
cell line
HepG28
stem cell
hESC1
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