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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 95ChIP-seq
Assay category
  • 95DNA binding
Target of assay
  • 100transcription factor
  • 95histone
  • 95histone modification
  • 54control
  • 49broad histone mark
  • 46narrow histone mark
  • 22RNA binding protein
  • 17chromatin remodeller
  • 2other context
  • 2other post-translational modification
Date released
  • 43August, 2017
  • 18November, 2017
  • 14February, 2018
  • 13December, 2017
  • 7October, 2017
Available data
  • 95fastq
  • 94bam
  • 93bigWig
  • 90bed narrowPeak
  • 44bigBed narrowPeak
  • 37bed broadPeak
  • 35tagAlign
  • 28bigBed broadPeak
  • 19bed bed3+
Organism
  • 89Homo sapiens
Biosample type
  • 28tissue
  • 26in vitro differentiated cells
  • 25primary cell
  • 15cell line
  • 1stem cell
Organ
  • 29pancreas
  • 16liver
  • 14epithelium
  • 12embryo
  • 10brain
  • 2vasculature
  • 1adipose tissue
  • 1blood vessel
  • 1connective tissue
Project
  • 95AMP
Genome assembly (visualization)
  • 93hg19
  • 91GRCh38
Lab
  • 95AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
Audit category:
  • 8missing controlled_by
Audit category:
  • 19inconsistent control read length
  • 3inconsistent assembly
  • 1inconsistent control run_type
BIOSAMPLE
ASSAY

95 results

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Clear Filters
ChIP-seq
tissue
islet of Langerhans11
pancreas8
brain7
adipose tissue1
liver1
in vitro differentiated cells
pancreatic endoderm10
primitive gut cell4
Hepatic endoderm2
Posterior foregut2
definitive endodermal cell2
primary cell
skeletal muscle myoblast12
pancreatic alpha cell5
pancreatic beta cell5
astrocyte of the cerebellum1
brain microvascular endothelial cell1
cell line
HepG215
stem cell
hESC1
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