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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 100ChIP-seq
Assay category
  • 100DNA binding
Target of assay
  • 100transcription factor
  • 95histone
  • 95histone modification
  • 54control
  • 49broad histone mark
  • 46narrow histone mark
  • 22RNA binding protein
  • 17chromatin remodeller
  • 2other context
  • 2other post-translational modification
Date released
  • 83November, 2017
  • 7November, 2018
  • 6December, 2017
  • 4August, 2017
Available data
  • 100fastq
  • 99bam
  • 99bed narrowPeak
  • 99bigWig
  • 93bigBed narrowPeak
  • 45bed broadPeak
  • 45bigBed broadPeak
  • 2bed bed3+
Organism
  • 100Homo sapiens
Biosample type
  • 87cell line
  • 5primary cell
  • 4in vitro differentiated cells
  • 4tissue
Organ
  • 90liver
  • 3brain
  • 2epithelium
  • 2vasculature
  • 1blood vessel
  • 1embryo
  • 1pancreas
Project
  • 100AMP
Genome assembly (visualization)
  • 99hg19
  • 82GRCh38
Lab
  • 100AMP-T2D consortium
Audit category:
  • 7missing controlled_by
Audit category:
  • 12inconsistent control read length
  • 8inconsistent control run_type
BIOSAMPLE
ASSAY

100 results

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Clear Filters
ChIP-seq
cell line
HepG287
primary cell
skeletal muscle myoblast2
astrocyte of the cerebellum1
brain microvascular endothelial cell1
choroid plexus epithelial cell1
in vitro differentiated cells
Posterior foregut1
definitive endodermal cell1
pancreatic endoderm1
primitive gut cell1
tissue
liver3
islet of Langerhans1
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