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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ATAC-seq
16
snATAC-seq
5
total RNA-seq
1
Hi-C
Assay category
64
DNA accessibility
5
Transcription
1
3D chromatin structure
Date released
39
May, 2022
16
February, 2021
5
January, 2019
5
September, 2017
3
August, 2017
1
December, 2018
1
March, 2019
Available data
39
zippedFastqFolder
31
fastq
14
bam
13
bigWig
8
bed narrowPeak
8
bigBed narrowPeak
5
tsv
1
bed broadPeak
Organism
70
Homo sapiens
Biosample type
63
primary cell
6
cell line
1
tissue
Organ
48
pancreas
47
epithelium
6
liver
Project
55
HPAP
15
AMP
Genome assembly (visualization)
13
GRCh38
13
hg19
Lab
55
Klaus Kaestner, Upenn
14
AMP-T2D consortium
1
Mark McCarthy, Oxford
Audit category:
16
audit script error
files.run_type!
single-ended
BIOSAMPLE
ASSAY
70 results
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ATAC-seq
snATAC-seq
total RNA-seq
Hi-C
primary cell
pancreatic alpha cell
25
Langerhans cell
16
pancreatic beta cell
16
pancreatic acinar cell
6
cell line
HepG2
5
1
tissue
islet of Langerhans
1
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