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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 48ATAC-seq
  • 6ChIP-seq
  • 1FAIRE-seq
Assay category
  • 49DNA accessibility
  • 6DNA binding
Target of assay
  • 5histone
  • 5histone modification
  • 3broad histone mark
  • 2narrow histone mark
  • 1control
Date released
  • 39May, 2022
  • 9August, 2017
  • 5September, 2017
  • 1March, 2019
  • 1November, 2018
Available data
  • 39zippedFastqFolder
  • 16bam
  • 16fastq
  • 14bed narrowPeak
  • 14bigWig
  • 13bigBed narrowPeak
  • 1bed broadPeak
Organism
  • 55Homo sapiens
Biosample type
  • 47primary cell
  • 8tissue
Organ
  • 105liver
  • 55pancreas
  • 48epithelium
  • 6embryo
  • 5blood
  • 5bodily fluid
  • 5connective tissue
  • 2adipose tissue
  • 1brain
Project
  • 39HPAP
  • 16AMP
Genome assembly (visualization)
  • 14hg19
  • 13GRCh38
Lab
  • 39Klaus Kaestner, Upenn
  • 15AMP-T2D consortium
  • 1Mark McCarthy, Oxford
Audit category:
  • 4inconsistent control read length
BIOSAMPLE
ASSAY

55 results

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Clear Filters
ATAC-seq
ChIP-seq
FAIRE-seq
primary cell
pancreatic alpha cell25
pancreatic beta cell16
pancreatic acinar cell6
tissue
pancreas41
islet of Langerhans12
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