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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 5ChIP-seq
  • 1ATAC-seq
  • 1FAIRE-seq
Assay category
  • 5DNA binding
  • 2DNA accessibility
Target of assay
  • 5transcription factor
Date released
  • 5August, 2017
  • 1March, 2019
  • 1November, 2018
Available data
  • 7bam
  • 7fastq
  • 6bigWig
  • 5bed bed3+
  • 4bed narrowPeak
  • 1bed broadPeak
  • 1bigBed narrowPeak
Organism
  • 7Homo sapiens
Biosample type
  • 4tissue
  • 3in vitro differentiated cells
Organ
  • 5connective tissue
  • 2adipose tissue
  • 2pancreas
Project
  • 7AMP
Genome assembly (visualization)
  • 6hg19
  • 5GRCh38
Lab
  • 6AMP-T2D consortium
  • 1Mark McCarthy, Oxford
Audit category:
  • 2missing controlled_by
Audit category:
  • 3inconsistent control read length
BIOSAMPLE
ASSAY

7 results

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Clear Filters
ChIP-seq
ATAC-seq
FAIRE-seq
tissue
white adipose tissue2
islet of Langerhans1
pancreas1
in vitro differentiated cells
adipocyte3
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