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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 75ChIP-seq
Assay category
  • 75DNA binding
Target of assay
  • 75transcription factor
  • 38control
  • 15histone
  • 15histone modification
  • 12broad histone mark
  • 12recombinant protein
  • 3chromatin remodeller
  • 3narrow histone mark
  • 1RNA binding protein
Date released
  • 32December, 2017
  • 31November, 2017
  • 6August, 2017
  • 4November, 2018
  • 2January, 2019
Available data
  • 75bam
  • 75fastq
  • 74bigWig
  • 68bed narrowPeak
  • 59bigBed narrowPeak
  • 5bed bed3+
  • 4bed broadPeak
  • 4bigBed broadPeak
Organism
  • 75Homo sapiens
Biosample type
  • 34tissue
  • 33cell line
  • 8in vitro differentiated cells
Organ
  • 63liver
  • 5connective tissue
  • 2adipose tissue
  • 2blood
  • 2bodily fluid
  • 2embryo
Project
  • 75AMP
Genome assembly (visualization)
  • 74hg19
  • 70GRCh38
Lab
  • 75AMP-T2D consortium
Audit category:
  • 27inconsistent control
Audit category:
  • 2missing controlled_by
Audit category:
  • 9inconsistent control read length
BIOSAMPLE
ASSAY

75 results

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Clear Filters
ChIP-seq
tissue
liver32
white adipose tissue2
cell line
HepG231
GM128782
in vitro differentiated cells
adipocyte3
pancreatic endoderm2
Posterior foregut1
definitive endodermal cell1
primitive gut cell1
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