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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 38snATAC-seq
  • 30ChIP-seq
Assay category
  • 38DNA accessibility
  • 30DNA binding
Target of assay
  • 43histone
  • 43histone modification
  • narrow histone mark
  • 20broad histone mark
  • 9transcription factor
  • 2RNA binding protein
  • 1control
Date released
  • 21May, 2022
  • 17February, 2021
  • 16September, 2018
  • 12August, 2017
  • 2October, 2018
Available data
  • 47fastq
  • 30bam
  • 29bigWig
  • 21zippedFastqFolder
  • 17bed narrowPeak
  • 4bed bed3+
  • 1bigBed narrowPeak
Organism
  • 68Homo sapiens
Biosample type
  • 57primary cell
  • 6tissue
  • 5in vitro differentiated cells
Organ
  • 25pancreas
  • 10epithelium
  • 5connective tissue
Project
  • 38HPAP
  • 30AMP
Genome assembly (visualization)
  • 29GRCh38
  • 29hg19
Lab
  • 38Klaus Kaestner, Upenn
  • 30AMP-T2D consortium
Audit category:
  • 17audit script error
Audit category:
  • 28missing controlled_by
target.investigated_as!
  • narrow histone mark
BIOSAMPLE
ASSAY

68 results

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Clear Filters
snATAC-seq
ChIP-seq
primary cell
Langerhans cell38
pancreatic endocrine cell9
pancreatic ductal cell6
pancreatic acinar cell4
tissue
islet of Langerhans4
pancreas2
in vitro differentiated cells
adipocyte5
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