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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
177
ChIP-seq
1
single cell RNA-seq
Assay category
177
DNA binding
1
Transcription
Target of assay
102
transcription factor
70
recombinant protein
64
histone
64
histone modification
37
broad histone mark
27
narrow histone mark
12
RNA binding protein
11
chromatin remodeller
11
control
Date released
70
November, 2017
31
August, 2017
21
December, 2017
21
October, 2018
20
November, 2018
12
January, 2019
2
December, 2018
1
September, 2020
Available data
177
bam
177
fastq
165
bed narrowPeak
165
bigWig
135
bigBed narrowPeak
1
zippedFastqFolder
Organism
178
Homo sapiens
Biosample type
97
cell line
46
in vitro differentiated cells
34
tissue
1
primary cell
Organ
108
liver
32
connective tissue
20
pancreas
15
epithelium
10
blood
10
bodily fluid
7
spleen
1
adipose tissue
Project
177
AMP
1
HPAP
Genome assembly (visualization)
165
GRCh38
162
hg19
Lab
177
AMP-T2D consortium
1
Klaus Kaestner, Upenn
Audit category:
1
inconsistent control
Audit category:
1
missing controlled_by
Audit category:
3
inconsistent control read length
files.run_type!
paired-ended
BIOSAMPLE
ASSAY
178 results
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ChIP-seq
single cell RNA-seq
cell line
HepG2
87
GM12878
10
in vitro differentiated cells
adipocyte
31
hepatocyte
15
tissue
body of pancreas
20
spleen
7
right lobe of liver
6
omental fat pad
1
primary cell
Langerhans cell
1
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