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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 177ChIP-seq
  • 1single cell RNA-seq
Assay category
  • 177DNA binding
  • 1Transcription
Target of assay
  • 102transcription factor
  • 70recombinant protein
  • 64histone
  • 64histone modification
  • 37broad histone mark
  • 27narrow histone mark
  • 12RNA binding protein
  • 11chromatin remodeller
  • 11control
Date released
  • 70November, 2017
  • 31August, 2017
  • 21December, 2017
  • 21October, 2018
  • 20November, 2018
  • 12January, 2019
  • 2December, 2018
  • 1September, 2020
Available data
  • 177bam
  • 177fastq
  • 165bed narrowPeak
  • 165bigWig
  • 135bigBed narrowPeak
  • 1zippedFastqFolder
Organism
  • 178Homo sapiens
Biosample type
  • 97cell line
  • 46in vitro differentiated cells
  • 34tissue
  • 1primary cell
Organ
  • 108liver
  • 32connective tissue
  • 20pancreas
  • 15epithelium
  • 10blood
  • 10bodily fluid
  • 7spleen
  • 1adipose tissue
Project
  • 177AMP
  • 1HPAP
Genome assembly (visualization)
  • 165GRCh38
  • 162hg19
Lab
  • 177AMP-T2D consortium
  • 1Klaus Kaestner, Upenn
Audit category:
  • 1inconsistent control
Audit category:
  • 1missing controlled_by
Audit category:
  • 3inconsistent control read length
files.run_type!
  • paired-ended
BIOSAMPLE
ASSAY

178 results

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Clear Filters
ChIP-seq
single cell RNA-seq
cell line
HepG287
GM1287810
in vitro differentiated cells
adipocyte31
hepatocyte15
tissue
body of pancreas20
spleen7
right lobe of liver6
omental fat pad1
primary cell
Langerhans cell1
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