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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
10
ATAC-seq
Assay category
16
DNA binding
10
DNA accessibility
Target of assay
11
control
3
other context
3
other post-translational modification
3
transcription factor
2
histone
2
histone modification
2
narrow histone mark
Date released
8
October, 2018
7
August, 2020
6
November, 2018
3
September, 2020
1
August, 2017
1
November, 2017
Available data
26
fastq
16
bam
15
bigWig
5
bed narrowPeak
5
bigBed narrowPeak
Organism
26
Homo sapiens
Biosample type
14
tissue
11
primary cell
1
cell line
Organ
10
epithelium
10
pancreas
8
adipose tissue
8
connective tissue
6
spleen
1
liver
Project
16
AMP
10
HPAP
Genome assembly (visualization)
15
GRCh38
5
hg19
Lab
16
AMP-T2D consortium
10
Klaus Kaestner, Upenn
Audit category:
1
missing controlled_by
Audit category:
1
inconsistent assembly
1
inconsistent control read length
1
inconsistent control run_type
BIOSAMPLE
ASSAY
26 results
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ChIP-seq
ATAC-seq
tissue
spleen
6
omental fat pad
4
subcutaneous adipose tissue
4
primary cell
pancreatic alpha cell
7
pancreatic beta cell
3
skeletal muscle myoblast
1
cell line
HepG2
1
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