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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 179ChIP-seq
  • 1single cell RNA-seq
Assay category
  • 179DNA binding
  • 1Transcription
Target of assay
  • 102transcription factor
  • 70recombinant protein
  • 66histone
  • 66histone modification
  • 37broad histone mark
  • 29narrow histone mark
  • 12RNA binding protein
  • 11chromatin remodeller
  • 11control
Date released
  • 71November, 2017
  • 32August, 2017
  • 21December, 2017
  • 21October, 2018
  • 20November, 2018
  • 12January, 2019
  • 2December, 2018
  • 1September, 2020
Available data
  • 179bam
  • 179fastq
  • 167bed narrowPeak
  • 167bigWig
  • 137bigBed narrowPeak
  • 1zippedFastqFolder
Organism
  • 180Homo sapiens
Biosample type
  • 98cell line
  • 46in vitro differentiated cells
  • 34tissue
  • 2primary cell
Organ
  • 109liver
  • 32connective tissue
  • 20pancreas
  • 15epithelium
  • 10blood
  • 10bodily fluid
  • 7spleen
  • 1adipose tissue
Project
  • 179AMP
  • 1HPAP
Genome assembly (visualization)
  • 167GRCh38
  • 164hg19
Lab
  • 179AMP-T2D consortium
  • 1Klaus Kaestner, Upenn
Audit category:
  • 1inconsistent control
Audit category:
  • 2missing controlled_by
Audit category:
  • 4inconsistent control read length
  • 1inconsistent assembly
  • 1inconsistent control run_type
BIOSAMPLE
ASSAY

180 results

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Clear Filters
ChIP-seq
single cell RNA-seq
cell line
HepG288
GM1287810
in vitro differentiated cells
adipocyte31
hepatocyte15
tissue
body of pancreas20
spleen7
right lobe of liver6
omental fat pad1
primary cell
Langerhans cell1
skeletal muscle myoblast1
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