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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 15ChIP-seq
  • 10ATAC-seq
Assay category
  • 15DNA binding
  • 10DNA accessibility
Target of assay
  • 12histone
  • 12histone modification
  • 7broad histone mark
  • 5narrow histone mark
  • 2RNA binding protein
  • 2transcription factor
  • 1chromatin remodeller
  • 1control
Date released
  • 15December, 2017
  • 7August, 2020
  • 3September, 2020
Available data
  • 25fastq
  • 24bigWig
  • 15bam
  • 14bed narrowPeak
  • 14bigBed narrowPeak
Organism
  • 25Homo sapiens
Biosample type
  • 15in vitro differentiated cells
  • 10primary cell
Organ
  • 109liver
  • 40connective tissue
  • 30pancreas
  • 25epithelium
  • 13spleen
  • 10blood
  • 10bodily fluid
  • 9adipose tissue
Project
  • 15AMP
  • 10HPAP
Genome assembly (visualization)
  • 24GRCh38
  • 14hg19
Lab
  • 15AMP-T2D consortium
  • 10Klaus Kaestner, Upenn
BIOSAMPLE
ASSAY

25 results

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ChIP-seq
ATAC-seq
in vitro differentiated cells
hepatocyte15
primary cell
pancreatic alpha cell7
pancreatic beta cell3
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