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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 119ChIP-seq
Assay category
  • 119DNA binding
Target of assay
  • 92transcription factor
  • 69recombinant protein
  • 24histone
  • 24histone modification
  • 13narrow histone mark
  • 11broad histone mark
  • 9chromatin remodeller
  • 6RNA binding protein
  • 3control
Date released
  • 70November, 2017
  • 17December, 2017
  • 17November, 2018
  • 7October, 2018
  • 5January, 2019
  • 2December, 2018
  • 1August, 2017
Available data
  • 119bam
  • 119fastq
  • 116bed narrowPeak
  • 116bigBed narrowPeak
  • 116bigWig
Organism
  • 119Homo sapiens
Biosample type
  • 94cell line
  • 15in vitro differentiated cells
  • 9tissue
  • 1primary cell
Organ
  • 103liver
  • 15epithelium
  • 8blood
  • 8bodily fluid
  • 7pancreas
Project
  • 119AMP
Genome assembly (visualization)
  • 116GRCh38
  • 113hg19
Lab
  • 119AMP-T2D consortium
Audit category:
  • 1inconsistent control
Audit category:
  • 1missing controlled_by
Audit category:
  • 4inconsistent control read length
  • 1inconsistent assembly
  • 1inconsistent control run_type
replication_type!
  • unreplicated
BIOSAMPLE
ASSAY

119 results

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Clear Filters
ChIP-seq
cell line
HepG286
GM128788
in vitro differentiated cells
hepatocyte15
tissue
body of pancreas7
right lobe of liver2
primary cell
skeletal muscle myoblast1
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