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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
ChIP-seq
10
ATAC-seq
1
single cell RNA-seq
Assay category
74
DNA binding
10
DNA accessibility
1
Transcription
Target of assay
42
histone
42
histone modification
26
broad histone mark
19
control
16
narrow histone mark
13
transcription factor
6
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
1
recombinant protein
Date released
31
August, 2017
22
October, 2018
9
November, 2018
7
August, 2020
7
January, 2019
4
December, 2017
4
September, 2020
1
November, 2017
Available data
84
fastq
74
bam
64
bigWig
54
bed narrowPeak
24
bigBed narrowPeak
1
zippedFastqFolder
Organism
85
Homo sapiens
Biosample type
39
tissue
31
in vitro differentiated cells
11
primary cell
4
cell line
Organ
40
connective tissue
23
pancreas
13
spleen
10
epithelium
9
adipose tissue
6
liver
2
blood
2
bodily fluid
Project
74
AMP
11
HPAP
Genome assembly (visualization)
64
GRCh38
54
hg19
Lab
74
AMP-T2D consortium
11
Klaus Kaestner, Upenn
Audit category:
1
missing controlled_by
BIOSAMPLE
ASSAY
85 results
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ChIP-seq
ATAC-seq
single cell RNA-seq
tissue
body of pancreas
13
spleen
13
omental fat pad
5
right lobe of liver
4
subcutaneous adipose tissue
4
in vitro differentiated cells
adipocyte
31
primary cell
pancreatic alpha cell
7
pancreatic beta cell
3
Langerhans cell
1
cell line
GM12878
2
HepG2
2
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