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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 29ChIP-seq
Assay category
  • 29DNA binding
Target of assay
  • 105transcription factor
  • 70recombinant protein
  • 66histone
  • 66histone modification
  • 37broad histone mark
  • 29narrow histone mark
  • 22control
  • 12RNA binding protein
  • 11chromatin remodeller
  • 3other context
  • 3other post-translational modification
Date released
  • 13August, 2017
  • 7December, 2017
  • 5October, 2018
  • 3January, 2019
  • 1November, 2017
Available data
  • 29bam
  • 29bed narrowPeak
  • 29bigWig
  • 29fastq
  • 17bigBed narrowPeak
Organism
  • 29Homo sapiens
Biosample type
  • 17in vitro differentiated cells
  • 9tissue
  • 2cell line
  • 1primary cell
Organ
  • 12connective tissue
  • 8liver
  • 5epithelium
  • 5pancreas
  • 2spleen
  • 1blood
  • 1bodily fluid
Project
  • 29AMP
Genome assembly (visualization)
  • 29GRCh38
  • 29hg19
Lab
  • 29AMP-T2D consortium
Audit category:
  • 1missing controlled_by
Audit category:
  • 2inconsistent control read length
  • 1inconsistent assembly
  • 1inconsistent control run_type
BIOSAMPLE
ASSAY

29 results

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Clear Filters
ChIP-seq
in vitro differentiated cells
adipocyte12
hepatocyte5
tissue
body of pancreas5
right lobe of liver2
spleen2
cell line
GM128781
HepG21
primary cell
skeletal muscle myoblast1
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