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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 105ChIP-seq
Assay category
  • 105DNA binding
Target of assay
  • 105transcription factor
  • 70recombinant protein
  • 66histone
  • 66histone modification
  • 37broad histone mark
  • 29narrow histone mark
  • 22control
  • 12RNA binding protein
  • 11chromatin remodeller
  • 3other context
  • 3other post-translational modification
Date released
  • 68November, 2017
  • 22November, 2018
  • 6August, 2017
  • 4January, 2019
  • 2December, 2017
  • 2December, 2018
  • 1October, 2018
Available data
  • 105bam
  • 105fastq
  • 104bed narrowPeak
  • 104bigWig
  • 98bigBed narrowPeak
Organism
  • 105Homo sapiens
Biosample type
  • 93cell line
  • 8in vitro differentiated cells
  • 4tissue
Organ
  • 87liver
  • 8blood
  • 8bodily fluid
  • 6connective tissue
  • 3spleen
  • 2epithelium
  • 1pancreas
Project
  • 105AMP
Genome assembly (visualization)
  • 104GRCh38
  • 101hg19
Lab
  • 105AMP-T2D consortium
Audit category:
  • 1inconsistent control
Audit category:
  • 1missing controlled_by
Audit category:
  • 2inconsistent control read length
BIOSAMPLE
ASSAY

105 results

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ChIP-seq
cell line
HepG285
GM128788
in vitro differentiated cells
adipocyte6
hepatocyte2
tissue
spleen3
body of pancreas1
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