Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
15
DNA binding
9
DNA accessibility
Target of assay
10
transcription factor
9
chromatin remodeller
6
RNA binding protein
4
control
1
histone
1
histone modification
1
narrow histone mark
Date released
10
January, 2019
8
January, 2021
3
November, 2018
2
December, 2018
1
January, 2018
Available data
15
bam
15
fastq
12
bigWig
11
bed narrowPeak
11
bigBed narrowPeak
Organism
24
Homo sapiens
Biosample type
16
cell line
8
primary cell
Organ
711
liver
657
connective tissue
651
pancreas
465
adipose tissue
393
heart
367
epithelium
354
kidney
285
brain
236
vasculature
230
blood vessel
159
bone element
141
artery
122
limb
96
musculature of body
61
eye
43
nerve
37
embryo
24
blood
24
bodily fluid
22
vein
20
lung
18
ureter
16
skeleton
8
spleen
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
16
AMP
8
T1D
Genome assembly (visualization)
12
hg19
11
GRCh38
Lab
16
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
files.run_type!
paired-ended
BIOSAMPLE
ASSAY
24 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
15
1
primary cell
peripheral blood mononuclear cell
8
Download