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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 408ChIP-seq
Assay category
  • 408DNA binding
Target of assay
  • 795histone modification
  • 794histone
  • 408narrow histone mark
  • 386broad histone mark
  • 216control
  • 169transcription factor
  • 46RNA binding protein
  • 11chromatin remodeller
  • 7recombinant protein
  • 5nucleotide modification
  • 3other context
  • 3other post-translational modification
Date released
  • 141October, 2019
  • 64May, 2021
  • 40August, 2017
  • 34May, 2019
  • 28November, 2017
  • 27May, 2020
  • 23April, 2019
  • 15May, 2024
  • 11August, 2021
  • 11June, 2019
  • 6October, 2018
  • 4November, 2019
  • 3March, 2020
  • 1October, 2017
Available data
  • 335bed narrowPeak
  • 335bigWig
  • 299bam
  • 161tagAlign
  • 112bigBed narrowPeak
  • 12bed broadPeak
  • 4fastq
  • 2bed bed3+
  • 1tagAlign bed3+
Organism
  • 408Homo sapiens
Biosample type
  • 300tissue
  • 75primary cell
  • 22in vitro differentiated cells
  • 11cell line
Organ
  • 113brain
  • 45liver
  • 40heart
  • 25pancreas
  • 24blood vessel
  • 24vasculature
  • 21epithelium
  • 20connective tissue
  • 15kidney
  • 15limb
  • 13musculature of body
  • 11adipose tissue
  • 8nerve
  • 6artery
  • 6vein
  • 4gonad
  • 4ovary
  • 3eye
  • 1lymph node
  • 1pituitary gland
Project
  • 364AMP
  • 44T1D
Genome assembly (visualization)
  • 306GRCh38
  • 306hg19
Lab
  • 331AMP-T2D consortium
  • 60Kyle Gaulton, UCSD
  • 15Patrick T. Ellinor, Broad
  • 2Bing Ren, UCSD
Audit category:
  • 17inconsistent ontology term
files.run_type!
  • single-ended
BIOSAMPLE
ASSAY

408 results

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Clear Filters
ChIP-seq
tissue
liver41
islet of Langerhans29
left cardiac atrium15
subcutaneous abdominal adipose tissue11
kidney10
primary cell
monocyte41
CD8-positive, alpha-beta T cell10
endothelial cell of umbilical vein6
epithelial cell of proximal tubule4
skeletal muscle satellite cell3
in vitro differentiated cells
embryonic stem cell10
neural progenitor cell7
adipocyte4
pancreatic PP cell1
cell line
EndoC_BH16
Panc13
HepG22
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