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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 169ChIP-seq
Assay category
  • 169DNA binding
Target of assay
  • 795histone modification
  • 794histone
  • 408narrow histone mark
  • 386broad histone mark
  • 216control
  • 169transcription factor
  • 46RNA binding protein
  • 11chromatin remodeller
  • 7recombinant protein
  • 5nucleotide modification
  • 3other context
  • 3other post-translational modification
Date released
  • 38November, 2017
  • 26December, 2018
  • 21November, 2018
  • 16May, 2021
  • 13October, 2018
  • 11August, 2021
  • 8January, 2019
  • 7October, 2019
  • 6April, 2019
  • 5February, 2021
  • 5May, 2019
  • 5May, 2024
  • 4June, 2019
  • 2December, 2017
  • 1August, 2017
  • 1November, 2019
Available data
  • 156bed narrowPeak
  • 156bigWig
  • 141bam
  • 122bigBed narrowPeak
  • 109fastq
  • 9tagAlign
Organism
  • 169Homo sapiens
Biosample type
  • 111cell line
  • 37tissue
  • 16in vitro differentiated cells
  • 5primary cell
Organ
  • 60liver
  • 41blood
  • 41bodily fluid
  • 17heart
  • 10kidney
  • 10pancreas
  • 7blood vessel
  • 7vasculature
  • 6connective tissue
  • 6spleen
  • 5adipose tissue
  • 5artery
  • 5epithelium
  • 1eye
Project
  • 169AMP
Genome assembly (visualization)
  • 151hg19
  • 143GRCh38
Lab
  • 141AMP-T2D consortium
  • 12Kyle Gaulton, UCSD
  • 11Bing Ren, UCSD
  • 5Patrick T. Ellinor, Broad
Audit category:
  • 14inconsistent ontology term
Audit category:
  • 6missing controlled_by
Audit category:
  • 8inconsistent control run_type
  • 7inconsistent control read length
files.run_type!
  • single-ended
BIOSAMPLE
ASSAY

169 results

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Clear Filters
ChIP-seq
cell line
HepG257
GM1287841
smooth muscle cell of the coronary artery4
RCC 7860 HIF1a re-expression3
RCC 7860 HIF2a over-expression2
tissue
body of pancreas8
spleen6
heart left ventricle5
left cardiac atrium5
omental fat pad3
in vitro differentiated cells
embryonic stem cell12
cardiomyocytes3
pancreatic PP cell1
primary cell
cardiac fibroblast1
cardiac muscle cell1
epithelial cell of proximal tubule1
kidney epithelial cell1
retinal pigment epithelial cell1
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